CDS

Accession Number TCMCG051C24385
gbkey CDS
Protein Id XP_024463289.1
Location join(697040..697069,697268..697334,697627..697774,697886..698043,699099..699364,699480..699698,699796..699904,699999..700114,700271..700369,700589..700698,700859..700933,701365..701443,701529..701675,701775..701855,702007..702126,702857..702979,703259..703336,703448..703536,703609..703717,703815..703883,703986..704096,705282..705337,705415..705592,705679..705780,705872..705943,706148..706213,706880..706945,707578..707664,707831..707944,708165..708239,708375..708461,708652..708693)
Gene LOC7486860
GeneID 7486860
Organism Populus trichocarpa

Protein

Length 1115aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024607521.1
Definition ubiquitin carboxyl-terminal hydrolase 12 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin carboxyl-terminal hydrolase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11838        [VIEW IN KEGG]
EC 3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04068        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04068        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004843        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019783        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036459        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0101005        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTCTCATGACTCCTCCTCCGTTAAATCAACAAGAAGACGACGAGATGTTGGTCCCACAAACTGAATTTGCTGATGGACCTCAGCCAATGGAAGTAGCACAAGCCGAAACTGCAACAGCAGTTGATGCACAGTCGGTGGATGATCCACCATCTGCTAGGTTTACATGGACGATTGATAATTTTTCGAGGCTAAATGCTAAGAAGCTCTACTCTGATGTTTTTGTTGTTGGAGGCTACAAGTGGCGGATATTGATTTTTCCAAAGGGTAACAATGTGGATCATTTATCCATGTATCTAGATGTTGCTGATTCAGCAACTTTGCCATATGGCTGGAGTCGATATGCGCAGTTTAGCTTGACTGTTATCAATCAACTTCATCAAAAGTACTCAATTCGGAAAGACACGCAGCACCAGTTCAATGCACGTGAGAGTGATTGGGGATTCACTTCATTCATGCCTCTTGGGGAATTGTATGACCCTGGGAGAGGGTATCTTGTAAATGACACGTGTGTGGTTGAAGCTGATGTTGCTGTTCGTAAGGTCATTGATTACTGGTCACATGATTCGAAGAAGGAGACCGGTTATGTTGGTCTAAAGAACCAAGGAGCTACATGCTACATGAACTCTCTCCTTCAGACGCTGTATCATATTCCTTATTTCAGAAAGGCTGTATATCATATGCCAACAACTGAGAATGATATCCCATCAGGGAGCATTCCTCTGGCTTTGCAGAGTTTGTTTTATAAACTTCAATACAGTGACACTAGCGTAGCTACAAAAGAGTTGACAAAGTCTTTTGGCTGGGATACATATGACTCTTTCATGCAGCATGATGTCCAAGAACTTAATAGGGTTCTGTGTGAAAAGCTTGAAGATAAAATGAAGGGAACTGTTGTGGAGGGCACTATACAACAGCTATTTGAAGGGCACCATATGAATTATATTGAATGCATCAATGTTGACTATAAGTCGACAAGAAAGGAGTCATTTTATGATCTTCAGCTTGATGTCAAAGGCTGTCGGGATGTTTATGCTTCTTTTGATAAGTATGTGGAGGTGGAACGTCTTGAAGGTGACAATAAATATCATGCTGAACAACATGGATTACAGGATGCTAGAAAGGGTGTCCTATTCATTGACTTCCCCCCAGTTCTCCAACTTCAACTTAAAAGGTTCGAGTATGATTTTATGCGGGATACAATGGTGAAGATAAATGATCGCTATGAGTTCCCTTTGCAACTTGATCTTGATAGAGAGAATGGGAAATATTTATCACCAGAGGCTGACCGCAGTGTCCGCAATCTATACACCCTTCACAGTGTTTTGGTTCACAGTGGTGGTGTGCATGGTGGACACTACTATGCTTATATCAGACCAACTCTCTCAGATCAGTGGTTCAAATTTGATGATGAGCGGGTGACCAAAGAGGATATCAAAAGGGCATTAGAGGAGCAGTATGGTGGTGAGGAAGAGTTACCACAGACAAATCCTGGCTTCAACAACTCTCCCTTCAAGTTTACAAAGTACTCAAATGCTTATATGCTTGTGTATATTCGTGAAAGTGACAAGGAAAAAATAATCTGTAATGTGGACGAGAAGGACATTGCAGAGCACCTCAGGATAAGATTGAAGAAAGAACAGGAGGAAAAGGAGCAAAAGAGAAAGGAAAAAGCGGAGGCGCACTTGTACACCATAATAAAGGTTGCACGCAGTGAGGATCTACTTGAACAGATTGGCAAGGATGTATATTTTGATCTTGTGGACCATGACAAAGTACGAAGTTTCCGTATCCAGAAACAGATAACCTTCAACCTTTTCAAGGAAGAAGTTGCTAAAGAATTTGGTATACCAGTGCAACTTCAACGTTTTTGGCTGTGGGCAAAGCGACAAAATCATACATACCGTCCAAATCGGCCACTGACTCCTCAGGAGGAAGCACAGTCTGTTGGACAATTGAGAGAGGTTTCTAATAAGGCAAATAACGCGGAGCTAAAGCTGTTTCTGGAAGCAGAAATTGGACAGGATTTGCGACCTGTTCCTCCACCTGAGAAGACTAAAGATGATATCCTTCTTTTCTTTAAACTTTATGATCCATCGAAGGAGGAACTCCGGTATGTAGGGAGGCTGTTTGTAAAGGGTAGCGGCAAGCCGTTGGAGATCCTGACGAAACTAAATGAAATCGCTGGCTTTGCTCCTGACCAGGAGATTGAACTTTACGAGGAAATAAAGTTTGAACCTAATGTCATGTGCGAACACATTGACAAGAGGCTCACTTTTCGTTCTAGTCAGCTTGAAGATGGAGATATTGTTTGCTATCAGAAACCCCCTCCAATGGGAAGTGACGAACAGTGCCGCTACCCTGATGTGCCTTCCTTCCTTGAGTACATGCACAATCGCCAGGTTGTTCGTTTTCGATCTTTGGAGAAATCGAAAGAGGATGAATTCTGTCTTGAGCTTTCAAAGCTCCACACTTATGATGATGTTGCGGAAAGAGTAGCTCACCATCTTGGCTTGGATGACCCATCCAAAATTAGGCTTACATCTCATAACTGTTACTCCCAGCAACCTAAACCCCAGCCCATCAAATTCCGAGGAGTGGATCATTTGTCTGATATGCTGGTGCACTACAATCAGACATCTGATATTCTATACTATGAAGTATTAGACATCCCTCTACCAGAATTGCAAGGCCTTAAAACATTAAAAGTTGCTTTTCATCATGCTACTAAGGATGAGGTAGTGATTCATACCATTAGATTGCCAAAACAGAGCACTGTAGGTGATGTCATTAATGACCTTAAGGCAAAGGTGGAGCTGTCTCATCCTAGTGCTGAACTTAGATTGCTTGAGGTTTTCTATCACAAGATCTACAAGATCTTTCCACACAATGAAAAAATCGAGAACATTAATGATCAATACTGGACACTACGTGCAGAGGAGGTTCCTGAAGAAGAGAAAAACCTTGCTCCTCACGATCGCTTGATTCATGTCTATCATTTCATGAAAGACACAACTCAAAACCAGGTGGTTCAGAATTTTGGAGAACCATTTTTCCTGGTCATTCACGAGGGTGAGACTTTGACTGAAGTCAAAATGCGCATACAGAAAAAATTGCAGGTTCCCGATGAAGAATTTTCAAAGTGGAAGTTTGCTTTTTTGTCTCTAGGTCGCCCTGAGTACCTTCAAGATTCAGACATCGTGTCCAGCCGTTTTCAGAGAAGGGATGTTTATGGTGCTTGGGAGCAGTATCTTGGATTGGAGCATTCTGACAATGCTCCTAAAAGGTCATATGCTGCTAATCAGAATCGTCATACATTTGAGAAGCCGGTAAAAATCTACAACTAG
Protein:  
MTLMTPPPLNQQEDDEMLVPQTEFADGPQPMEVAQAETATAVDAQSVDDPPSARFTWTIDNFSRLNAKKLYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSLTVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADVAVRKVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARSEDLLEQIGKDVYFDLVDHDKVRSFRIQKQITFNLFKEEVAKEFGIPVQLQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKANNAELKLFLEAEIGQDLRPVPPPEKTKDDILLFFKLYDPSKEELRYVGRLFVKGSGKPLEILTKLNEIAGFAPDQEIELYEEIKFEPNVMCEHIDKRLTFRSSQLEDGDIVCYQKPPPMGSDEQCRYPDVPSFLEYMHNRQVVRFRSLEKSKEDEFCLELSKLHTYDDVAERVAHHLGLDDPSKIRLTSHNCYSQQPKPQPIKFRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKAKVELSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYWTLRAEEVPEEEKNLAPHDRLIHVYHFMKDTTQNQVVQNFGEPFFLVIHEGETLTEVKMRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPKRSYAANQNRHTFEKPVKIYN